Lactobacillus_F paraplantarum
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus_F; s__Lactobacillus_F paraplantarum
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus paraplantarum
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus paraplantarum; x__Lactobacillus paraplantarum DSM 10667
NCBI Strain Identifiers DSM 10667
GTDB Type Material Designation type strain of species
GTDB Representative of Species True
Genome Characteristics
CheckM Completeness 99.38%
CheckM Contamination 3.09%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 3
23S Count 7
tRNA Count 20
Contig Count 258
N50 Contigs 93,770 bp
Longest Contig 578,869 bp
Scaffold Count 252
N50 Scaffolds 93,771 bp
Longest Scaffold 578,869 bp
Genome Size 3,395,753 bp
Protein Count 3,318
Coding Density 83.25%
GC Percentage 43.69%
Ambiguous Bases 0
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM143565v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02369508
Country France
Date 2015-11-6
Genbank Assembly Accession GCA_001435655.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source beer contaminant
Latitude Longitude None
Molecule Count 0
Protein Count 3,323
Refseq Category na
Seq Rel Date 2015/11/06
Spanned Gaps 6
Species Taxid 60520
SSU Count 3
Submitter Shanghai Majorbio
Taxid 1423789
Total Gap Length 1051
Translation Table 11
tRNA Count (total) 50
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master AZEO00000000.1