GTDB Taxonomy | d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactiplantibacillus; s__Lactiplantibacillus paraplantarum |
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Filtered NCBI Taxonomy | d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus paraplantarum |
Unfiltered NCBI Taxonomy | d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus paraplantarum; x__Lactobacillus paraplantarum DSM 10667 |
NCBI Strain Identifiers | DSM 10667 |
GTDB Type Material Designation | type strain of species |
GTDB Representative of Species | False (representative is GCA_003641145.1 ) |
CheckM Completeness | 99.38% |
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CheckM Contamination | 3.09% |
CheckM Strain Heterogeneity | 0.0 |
5S Count | 0 |
16S Count | 3 |
23S Count | 7 |
tRNA Count | 20 |
Contig Count | 258 |
N50 Contigs | 93,771 bp |
Longest Contig | 578,869 bp |
Scaffold Count | 252 |
N50 Scaffolds | 93,771 bp |
Longest Scaffold | 578,869 bp |
Genome Size | 3,395,753 bp |
Protein Count | 3,318 |
Coding Density | 83.25% |
GC Percentage | 43.69% |
Ambiguous Bases | 25 |
GTDB representative | GCA_003641145.1 |
GTDB representative of species | False |
Assembly Level | Scaffold |
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Assembly Name | ASM143565v1 |
Assembly Type | n/a |
Bioproject | PRJNA224116 |
Biosample | SAMN02369508 |
Country | France |
Date | 2015-11-6 |
Genbank Assembly Accession | GCA_001435655.1 |
Genome Category | Isolate |
Genome Representation | full |
Isolate | None |
Isolation Source | beer contaminant |
Latitude Longitude | None |
Molecule Count | N/A |
CDS Count | 3,323 |
Refseq Category | na |
Seq Rel Date | 2015/11/06 |
Spanned Gaps | 6 |
Species Taxid | 60520 |
SSU Count | 3 |
Submitter | Shanghai Majorbio |
Taxid | 1423789 |
Total Gap Length | 1051 |
Translation Table | 11 |
tRNA Count (total) | 50 |
Type Material | assembly from type material |
Unspanned Gaps | 0 |
Version Status | latest |
WGS Master | AZEO00000000.1 |