| GTDB Taxonomy | d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactiplantibacillus; s__Lactiplantibacillus paraplantarum |
|---|---|
| Filtered NCBI Taxonomy | d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus paraplantarum |
| Unfiltered NCBI Taxonomy | d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus paraplantarum; x__Lactobacillus paraplantarum DSM 10667 |
| NCBI Strain Identifiers | DSM 10667 |
| GTDB Type Material Designation | type strain of species |
| GTDB Representative of Species | False (representative is GCA_003641145.1 ) |
| CheckM Completeness | 99.38% |
|---|---|
| CheckM Contamination | 3.09% |
| CheckM Strain Heterogeneity | 0.0 |
| 5S Count | 0 |
| 16S Count | 3 |
| 23S Count | 7 |
| tRNA Count | 20 |
| Contig Count | 258 |
| N50 Contigs | 93,771 bp |
| Longest Contig | 578,869 bp |
| Scaffold Count | 252 |
| N50 Scaffolds | 93,771 bp |
| Longest Scaffold | 578,869 bp |
| Genome Size | 3,395,753 bp |
| Protein Count | 3,318 |
| Coding Density | 83.25% |
| GC Percentage | 43.69% |
| Ambiguous Bases | 25 |
| GTDB representative | GCA_003641145.1 |
| GTDB representative of species | False |
| Assembly Level | Scaffold |
|---|---|
| Assembly Name | ASM143565v1 |
| Assembly Type | n/a |
| Bioproject | PRJNA224116 |
| Biosample | SAMN02369508 |
| Country | France |
| Date | 2015-11-6 |
| Genbank Assembly Accession | GCA_001435655.1 |
| Genome Category | Isolate |
| Genome Representation | full |
| Isolate | None |
| Isolation Source | beer contaminant |
| Latitude Longitude | None |
| Molecule Count | N/A |
| CDS Count | 3,323 |
| Refseq Category | na |
| Seq Rel Date | 2015/11/06 |
| Spanned Gaps | 6 |
| Species Taxid | 60520 |
| SSU Count | 3 |
| Submitter | Shanghai Majorbio |
| Taxid | 1423789 |
| Total Gap Length | 1051 |
| Translation Table | 11 |
| tRNA Count (total) | 50 |
| Type Material | assembly from type material |
| Unspanned Gaps | 0 |
| Version Status | latest |
| WGS Master | AZEO00000000.1 |