Schleiferilactobacillus perolens
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Schleiferilactobacillus; s__Schleiferilactobacillus perolens
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus perolens
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus perolens; x__Lactobacillus perolens DSM 12744
NCBI Strain Identifiers DSM 12744
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.48%
CheckM Contamination 0.52%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 2
23S Count 3
tRNA Count 19
Contig Count 101
N50 Contigs 292,153 bp
Longest Contig 544,927 bp
Scaffold Count 101
N50 Scaffolds 292,153 bp
Longest Scaffold 544,927 bp
Genome Size 3,309,179 bp
Protein Count 3,210
Coding Density 89.23%
GC Percentage 49.08%
Ambiguous Bases 14
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM143558v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02369469
Country Germany
Date 2015-11-6
Genbank Assembly Accession GCA_001435585.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source orange lemonade
Latitude Longitude None
Molecule Count N/A
CDS Count 3,137
Refseq Category representative genome
Seq Rel Date 2015/11/06
Spanned Gaps 0
Species Taxid 100468
SSU Count 2
Submitter Shanghai Majorbio
Taxid 1423792
Total Gap Length 0
Translation Table 11
tRNA Count (total) 48
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master AZEC00000000.1