Limosilactobacillus antri
Isolate HQ 16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Limosilactobacillus; s__Limosilactobacillus antri
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus antri
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus antri; x__Lactobacillus antri DSM 16041
NCBI Strain Identifiers DSM 16041
GTDB Type Material Designation type strain of species
GTDB Representative of Species False (representative is GCA_000160835.1)
Genome Characteristics
CheckM Completeness 99.37%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 3
tRNA Count 19
Contig Count 92
N50 Contigs 67,174 bp
Longest Contig 193,951 bp
Scaffold Count 92
N50 Scaffolds 67,174 bp
Longest Scaffold 193,951 bp
Genome Size 2,241,837 bp
Protein Count 2,134
Coding Density 87.79%
GC Percentage 51.11%
Ambiguous Bases 5
GTDB representative GCA_000160835.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM143547v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02369390
Country Sweden
Date 2015-11-6
Genbank Assembly Accession GCA_001435475.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source gastric biopsies; stomach mucosa
Latitude Longitude None
Molecule Count N/A
CDS Count 2,113
Refseq Category na
Seq Rel Date 2015/11/06
Spanned Gaps 0
Species Taxid 227943
SSU Count 1
Submitter Shanghai Majorbio
Taxid 525309
Total Gap Length 0
Translation Table 11
tRNA Count (total) 51
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master AZDK00000000.1