Latilactobacillus fuchuensis
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Latilactobacillus; s__Latilactobacillus fuchuensis
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus fuchuensis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus fuchuensis; x__Lactobacillus fuchuensis DSM 14340 = JCM 11249
NCBI Strain Identifiers DSM 14340
GTDB Type Material Designation type strain of species
GTDB Representative of Species False (representative is GCA_000615805.1)
Genome Characteristics
CheckM Completeness 98.91%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 87
N50 Contigs 53,800 bp
Longest Contig 132,396 bp
Scaffold Count 76
N50 Scaffolds 56,569 bp
Longest Scaffold 150,512 bp
Genome Size 2,122,254 bp
Protein Count 2,031
Coding Density 87.31%
GC Percentage 41.78%
Ambiguous Bases N/A
GTDB representative GCA_000615805.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM143506v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02369428
Country Japan
Date 2015-11-6
Genbank Assembly Accession GCA_001435065.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source vacuum-packaged beef
Latitude Longitude None
Molecule Count N/A
CDS Count 1,999
Refseq Category na
Seq Rel Date 2015/11/06
Spanned Gaps 11
Species Taxid 164393
SSU Count 1
Submitter Shanghai Majorbio
Taxid 1423747
Total Gap Length 358
Translation Table 11
tRNA Count (total) 56
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master AZEX00000000.1