Lactobacillus gallinarum
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus gallinarum
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus gallinarum
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus gallinarum; x__Lactobacillus gallinarum DSM 10532 = JCM 2011
NCBI Strain Identifiers DSM 10532
GTDB Type Material Designation type strain of species
GTDB Representative of Species False (representative is GCA_000614735.1)
Genome Characteristics
CheckM Completeness 98.94%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 101
N50 Contigs 65,331 bp
Longest Contig 127,064 bp
Scaffold Count 86
N50 Scaffolds 74,294 bp
Longest Scaffold 150,542 bp
Genome Size 1,937,187 bp
Protein Count 1,963
Coding Density 88.09%
GC Percentage 36.48%
Ambiguous Bases N/A
GTDB representative GCA_000614735.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM143497v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02369396
Country None
Date 2015-11-6
Genbank Assembly Accession GCA_001434975.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source crop
Latitude Longitude None
Molecule Count N/A
CDS Count 1,933
Refseq Category na
Seq Rel Date 2015/11/06
Spanned Gaps 15
Species Taxid 52242
SSU Count 1
Submitter Shanghai Majorbio
Taxid 1423748
Total Gap Length 785
Translation Table 11
tRNA Count (total) 56
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master AZEL00000000.1