Liquorilactobacillus uvarum
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Liquorilactobacillus; s__Liquorilactobacillus uvarum
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus uvarum
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus uvarum; x__Lactobacillus uvarum DSM 19971
NCBI Strain Identifiers DSM 19971
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.48%
CheckM Contamination 0.52%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 171
N50 Contigs 83,835 bp
Longest Contig 210,276 bp
Scaffold Count 164
N50 Scaffolds 96,515 bp
Longest Scaffold 215,189 bp
Genome Size 2,686,405 bp
Protein Count 2,626
Coding Density 84.45%
GC Percentage 36.88%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM143493v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02369480
Country Spain
Date 2015-11-6
Genbank Assembly Accession GCA_001434935.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source must of Bobal grape variety
Latitude Longitude None
Molecule Count N/A
CDS Count 2,565
Refseq Category representative genome
Seq Rel Date 2015/11/06
Spanned Gaps 7
Species Taxid 303240
SSU Count 1
Submitter Shanghai Majorbio
Taxid 1423812
Total Gap Length 497
Translation Table 11
tRNA Count (total) 48
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master AZEG00000000.1