Liquorilactobacillus hordei
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Liquorilactobacillus; s__Liquorilactobacillus hordei
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus hordei
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus hordei; x__Lactobacillus hordei DSM 19519
NCBI Strain Identifiers DSM 19519
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (2 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.21%
CheckM Contamination 0.1%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 2
tRNA Count 20
Contig Count 145
N50 Contigs 45,651 bp
Longest Contig 175,012 bp
Scaffold Count 137
N50 Scaffolds 45,651 bp
Longest Scaffold 175,012 bp
Genome Size 2,298,009 bp
Protein Count 2,294
Coding Density 86.22%
GC Percentage 34.77%
Ambiguous Bases 1
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM143484v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02369452
Country Belgium
Date 2015-11-6
Genbank Assembly Accession GCA_001434845.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source malted barley
Latitude Longitude None
Molecule Count N/A
CDS Count 2,236
Refseq Category representative genome
Seq Rel Date 2015/11/06
Spanned Gaps 8
Species Taxid 468911
SSU Count 1
Submitter Shanghai Majorbio
Taxid 1423759
Total Gap Length 733
Translation Table 11
tRNA Count (total) 55
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master AZDX00000000.1