Lentilactobacillus buchneri
Isolate HQ 16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lentilactobacillus; s__Lentilactobacillus buchneri
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus buchneri
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus buchneri; x__Lactobacillus buchneri DSM 20057
NCBI Strain Identifiers DSM 20057
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (13 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.06%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 18
Contig Count 90
N50 Contigs 64,181 bp
Longest Contig 165,310 bp
Scaffold Count 90
N50 Scaffolds 64,181 bp
Longest Scaffold 165,310 bp
Genome Size 2,446,657 bp
Protein Count 2,373
Coding Density 87.34%
GC Percentage 44.41%
Ambiguous Bases 9
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM143473v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02369438
Country None
Date 2015-11-6
Genbank Assembly Accession GCA_001434735.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source tomato pulp
Latitude Longitude None
Molecule Count N/A
CDS Count 2,318
Refseq Category na
Seq Rel Date 2015/11/06
Spanned Gaps 0
Species Taxid 1581
SSU Count 2
Submitter Shanghai Majorbio
Taxid 1423728
Total Gap Length 0
Translation Table 11
tRNA Count (total) 49
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master AZDM00000000.1