Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Dellaglioa; s__Dellaglioa algida
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus algidus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus algidus; x__Lactobacillus algidus DSM 15638
NCBI Strain Identifiers DSM 15638
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (2 genomes in species cluster)
Genome Characteristics
CheckM Completeness 98.69%
CheckM Contamination 0.17%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 28
N50 Contigs 150,125 bp
Longest Contig 333,197 bp
Scaffold Count 28
N50 Scaffolds 150,125 bp
Longest Scaffold 333,197 bp
Genome Size 1,590,323 bp
Protein Count 1,546
Coding Density 89.55%
GC Percentage 36.03%
Ambiguous Bases 1
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM143469v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02369425
Country None
Date 2015-11-6
Genbank Assembly Accession GCA_001434695.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source vacuum-packaged beef
Latitude Longitude None
Molecule Count N/A
CDS Count 1,525
Refseq Category representative genome
Seq Rel Date 2015/11/06
Spanned Gaps 0
Species Taxid 105612
SSU Count 1
Submitter Shanghai Majorbio
Taxid 1423719
Total Gap Length 0
Translation Table 11
tRNA Count (total) 46
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master AZDI00000000.1