Lentilactobacillus hilgardii
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lentilactobacillus; s__Lentilactobacillus hilgardii
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus hilgardii
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus hilgardii; x__Lactobacillus hilgardii DSM 20176 = ATCC 8290
NCBI Strain Identifiers DSM 20176
GTDB Type Material Designation type strain of species
GTDB Representative of Species False (representative is GCA_000159315.1)
Genome Characteristics
CheckM Completeness 99.38%
CheckM Contamination 0.31%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 4
23S Count 2
tRNA Count 19
Contig Count 125
N50 Contigs 64,046 bp
Longest Contig 218,898 bp
Scaffold Count 125
N50 Scaffolds 64,046 bp
Longest Scaffold 218,898 bp
Genome Size 2,603,106 bp
Protein Count 2,579
Coding Density 84.51%
GC Percentage 39.58%
Ambiguous Bases 29
GTDB representative GCA_000159315.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM143465v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02369502
Country None
Date 2015-11-6
Genbank Assembly Accession GCA_001434655.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source wine
Latitude Longitude None
Molecule Count N/A
CDS Count 2,529
Refseq Category na
Seq Rel Date 2015/11/06
Spanned Gaps 0
Species Taxid 1588
SSU Count 4
Submitter Shanghai Majorbio
Taxid 1423757
Total Gap Length 0
Translation Table 11
tRNA Count (total) 53
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master AZDF00000000.1