Limosilactobacillus reuteri
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Limosilactobacillus; s__Limosilactobacillus reuteri
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus reuteri
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus reuteri; x__Lactobacillus reuteri DSM 20016
NCBI Strain Identifiers DSM 20016
GTDB Type Material Designation type strain of species
GTDB Representative of Species False (representative is GCA_000016825.1)
Genome Characteristics
CheckM Completeness 99.45%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 3
tRNA Count 20
Contig Count 151
N50 Contigs 56,054 bp
Longest Contig 108,869 bp
Scaffold Count 150
N50 Scaffolds 56,054 bp
Longest Scaffold 108,869 bp
Genome Size 1,935,860 bp
Protein Count 1,994
Coding Density 88.13%
GC Percentage 38.63%
Ambiguous Bases 14
GTDB representative GCA_000016825.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM143461v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02369412
Country None
Date 2015-11-6
Genbank Assembly Accession GCA_001434615.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source intestine of adult
Latitude Longitude None
Molecule Count N/A
CDS Count 1,974
Refseq Category na
Seq Rel Date 2015/11/06
Spanned Gaps 1
Species Taxid 1598
SSU Count 2
Submitter Shanghai Majorbio
Taxid 557436
Total Gap Length 161
Translation Table 11
tRNA Count (total) 52
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master AZDD00000000.1