Companilactobacillus crustorum
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Companilactobacillus; s__Companilactobacillus crustorum
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus crustorum
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus crustorum; x__Lactobacillus crustorum JCM 15951
NCBI Strain Identifiers JCM 15951
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (4 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.48%
CheckM Contamination 1.05%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 101
N50 Contigs 50,865 bp
Longest Contig 139,461 bp
Scaffold Count 101
N50 Scaffolds 50,865 bp
Longest Scaffold 139,461 bp
Genome Size 2,219,511 bp
Protein Count 2,190
Coding Density 87.42%
GC Percentage 35.00%
Ambiguous Bases 10
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM143458v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02369486
Country None
Date 2015-11-6
Genbank Assembly Accession GCA_001434585.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Wheat sourdough
Latitude Longitude None
Molecule Count N/A
CDS Count 2,138
Refseq Category na
Seq Rel Date 2015/11/06
Spanned Gaps 0
Species Taxid 392416
SSU Count 1
Submitter Shanghai Majorbio
Taxid 1423737
Total Gap Length 0
Translation Table 11
tRNA Count (total) 41
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master AZDB00000000.1