Limosilactobacillus oris
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Limosilactobacillus; s__Limosilactobacillus oris
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus oris
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus oris; x__Lactobacillus oris DSM 4864
NCBI Strain Identifiers DSM 4864
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (3 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.45%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 75
N50 Contigs 51,959 bp
Longest Contig 290,001 bp
Scaffold Count 75
N50 Scaffolds 51,959 bp
Longest Scaffold 290,001 bp
Genome Size 2,031,774 bp
Protein Count 1,942
Coding Density 87.68%
GC Percentage 49.98%
Ambiguous Bases 11
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM143446v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02369408
Country None
Date 2015-11-6
Genbank Assembly Accession GCA_001434465.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source saliva
Latitude Longitude None
Molecule Count N/A
CDS Count 1,902
Refseq Category na
Seq Rel Date 2015/11/06
Spanned Gaps 0
Species Taxid 1632
SSU Count 1
Submitter Shanghai Majorbio
Taxid 1423779
Total Gap Length 0
Translation Table 11
tRNA Count (total) 52
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master AZGE00000000.1