Lentilactobacillus kisonensis
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lentilactobacillus; s__Lentilactobacillus kisonensis
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus kisonensis
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus kisonensis; x__Lactobacillus kisonensis DSM 19906 = JCM 15041
NCBI Strain Identifiers DSM 19906
GTDB Type Material Designation type strain of species
GTDB Representative of Species False (representative is GCA_001311425.1)
Genome Characteristics
CheckM Completeness 99.25%
CheckM Contamination 0.21%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 4
23S Count 1
tRNA Count 18
Contig Count 122
N50 Contigs 83,891 bp
Longest Contig 322,260 bp
Scaffold Count 122
N50 Scaffolds 83,891 bp
Longest Scaffold 322,260 bp
Genome Size 3,006,215 bp
Protein Count 2,819
Coding Density 83.65%
GC Percentage 41.74%
Ambiguous Bases 7
GTDB representative GCA_001311425.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM143413v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02369458
Country Japan
Date 2015-11-6
Genbank Assembly Accession GCA_001434135.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source non-salted pickle solution used in production of sunki (Japanese traditional fermented leaves and stems of red turnips)
Latitude Longitude None
Molecule Count N/A
CDS Count 2,812
Refseq Category na
Seq Rel Date 2015/11/06
Spanned Gaps 0
Species Taxid 481722
SSU Count 4
Submitter Shanghai Majorbio
Taxid 1423766
Total Gap Length 0
Translation Table 11
tRNA Count (total) 47
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master AZEB00000000.1