Fusobacterium polymorphum
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Fusobacteriota; c__Fusobacteriia; o__Fusobacteriales; f__Fusobacteriaceae; g__Fusobacterium; s__Fusobacterium polymorphum
Filtered NCBI Taxonomy d__Bacteria; p__Fusobacteria; c__Fusobacteriia; o__Fusobacteriales; f__Fusobacteriaceae; g__Fusobacterium; s__Fusobacterium nucleatum
Unfiltered NCBI Taxonomy d__Bacteria; p__Fusobacteria; c__Fusobacteriia; o__Fusobacteriales; f__Fusobacteriaceae; g__Fusobacterium; s__Fusobacterium nucleatum; sb__Fusobacterium nucleatum subsp. polymorphum
NCBI Strain Identifiers ChDC F306
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001457555.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 4
16S Count 5
23S Count 4
tRNA Count 19
Contig Count 3
N50 Contigs 2,600,840 bp
Longest Contig 2,600,840 bp
Scaffold Count 3
N50 Scaffolds 2,600,840 bp
Longest Scaffold 2,600,840 bp
Genome Size 2,622,370 bp
Protein Count 2,506
Coding Density 90.19%
GC Percentage 26.83%
Ambiguous Bases N/A
GTDB representative GCA_001457555.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM143395v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03263152
Country South Korea: Gwangju
Date 2015-11-6
Genbank Assembly Accession GCA_001433955.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source subgingival dental plaque
Latitude Longitude 36.09 N 128.05 E
Molecule Count 3
CDS Count 2,501
Refseq Category na
Seq Rel Date 2015/11/06
Spanned Gaps 0
Species Taxid 851
SSU Count 4
Submitter Chosun University
Taxid 76857
Total Gap Length 0
Translation Table 11
tRNA Count (total) 47
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None