Lactobacillus acidophilus
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus acidophilus
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus acidophilus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Lactobacillaceae; g__Lactobacillus; s__Lactobacillus acidophilus; x__Lactobacillus acidophilus DSM 20079 = JCM 1132 = NBRC 13951
NCBI Strain Identifiers DSM 20079
GTDB Type Material Designation type strain of species
GTDB Representative of Species False (representative is GCA_001591845.1)
Genome Characteristics
CheckM Completeness 98.94%
CheckM Contamination 0.06%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 32
N50 Contigs 166,846 bp
Longest Contig 264,859 bp
Scaffold Count 30
N50 Scaffolds 167,501 bp
Longest Scaffold 404,580 bp
Genome Size 1,954,043 bp
Protein Count 1,896
Coding Density 89.07%
GC Percentage 34.59%
Ambiguous Bases N/A
GTDB representative GCA_001591845.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM143389v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN02369388
Country None
Date 2015-11-6
Genbank Assembly Accession GCA_001433895.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 1,889
Refseq Category na
Seq Rel Date 2015/11/06
Spanned Gaps 2
Species Taxid 1579
SSU Count 1
Submitter Shanghai Majorbio
Taxid 1423717
Total Gap Length 381
Translation Table 11
tRNA Count (total) 45
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master AZCS00000000.1