Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Campylobacterota; c__Campylobacteria; o__Campylobacterales; f__Helicobacteraceae; g__Helicobacter; s__Helicobacter pylori
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Epsilonproteobacteria; o__Campylobacterales; f__Helicobacteraceae; g__Helicobacter; s__Helicobacter pylori
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; x__delta/epsilon subdivisions; c__Epsilonproteobacteria; o__Campylobacterales; f__Helicobacteraceae; g__Helicobacter; s__Helicobacter pylori
NCBI Strain Identifiers 7C
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900478295.1)
Genome Characteristics
CheckM Completeness 99.32%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 2
N50 Contigs 1,624,441 bp
Longest Contig 1,624,441 bp
Scaffold Count 2
N50 Scaffolds 1,624,441 bp
Longest Scaffold 1,624,441 bp
Genome Size 1,631,276 bp
Protein Count 1,535
Coding Density 90.51%
GC Percentage 39.01%
Ambiguous Bases 14
GTDB representative GCA_900478295.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM143351v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03144736
Country Mexico
Date 2015-11-5
Genbank Assembly Accession GCA_001433515.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Gastric biopsy
Latitude Longitude 19.332749 N 99.179174 W
Molecule Count 2
CDS Count 1,548
Refseq Category na
Seq Rel Date 2015/11/05
Spanned Gaps 0
Species Taxid 210
SSU Count 2
Submitter Universidad Nacional Autonoma de Mexico
Taxid 210
Total Gap Length 0
Translation Table 11
tRNA Count (total) 36
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None