Listeria monocytogenes
Isolate HQ 5S/16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Lactobacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Listeriaceae; g__Listeria; s__Listeria monocytogenes
NCBI Strain Identifiers F6540
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900187225.1)
Genome Characteristics
CheckM Completeness 99.45%
CheckM Contamination 0.27%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 18
Contig Count 11
N50 Contigs 523,917 bp
Longest Contig 1,246,297 bp
Scaffold Count 11
N50 Scaffolds 523,917 bp
Longest Scaffold 1,246,297 bp
Genome Size 2,881,130 bp
Protein Count 2,848
Coding Density 90.12%
GC Percentage 37.91%
Ambiguous Bases N/A
GTDB representative GCA_900187225.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name ASM143236v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04211877
Country Canada: Ontario
Date 2015-11-5
Genbank Assembly Accession GCA_001432365.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Food
Latitude Longitude 43.83452678223684 N 79.62888624999994 W
Molecule Count N/A
CDS Count 2,896
Refseq Category na
Seq Rel Date 2015/11/05
Spanned Gaps 0
Species Taxid 1639
SSU Count 1
Submitter PHO
Taxid 1639
Total Gap Length 0
Translation Table 11
tRNA Count (total) 49
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LMTM00000000.1