Campylobacter_D jejuni
Isolate HQ 16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Campylobacterota; c__Campylobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter_D; s__Campylobacter_D jejuni
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Epsilonproteobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter; s__Campylobacter jejuni
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; x__delta/epsilon subdivisions; c__Epsilonproteobacteria; o__Campylobacterales; f__Campylobacteraceae; g__Campylobacter; s__Campylobacter jejuni
NCBI Strain Identifiers T1-21
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001457695.1)
Genome Characteristics
CheckM Completeness 95.43%
CheckM Contamination 0.11%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 3
23S Count 3
tRNA Count 19
Contig Count 3
N50 Contigs 1,153,972 bp
Longest Contig 1,153,972 bp
Scaffold Count 2
N50 Scaffolds 1,565,978 bp
Longest Scaffold 1,565,978 bp
Genome Size 1,648,710 bp
Protein Count 1,725
Coding Density 93.09%
GC Percentage 30.55%
Ambiguous Bases N/A
GTDB representative GCA_001457695.1
GTDB representative of species False
NCBI Metadata
Assembly Level Chromosome
Assembly Name ASM143234v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04221430
Country USA: Tulsa; Oklahoma
Date 2015-11-5
Genbank Assembly Accession GCA_001432345.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source retail chicken
Latitude Longitude 36.1314 N 95.93720000000002 W
Molecule Count 2
CDS Count 1,701
Refseq Category na
Seq Rel Date 2015/11/05
Spanned Gaps 1
Species Taxid 197
SSU Count 3
Submitter University of Tulsa
Taxid 197
Total Gap Length 102
Translation Table 11
tRNA Count (total) 39
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None