Stenotrophomonas maltophilia_K
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Stenotrophomonas; s__Stenotrophomonas maltophilia_K
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Stenotrophomonas; s__Stenotrophomonas maltophilia
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Stenotrophomonas; x__Stenotrophomonas maltophilia group; s__Stenotrophomonas maltophilia
NCBI Strain Identifiers LMG 978
GTDB Type Material Designation type strain of heterotypic synonym
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.08%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 109
N50 Contigs 83,392 bp
Longest Contig 277,841 bp
Scaffold Count 109
N50 Scaffolds 83,392 bp
Longest Scaffold 277,841 bp
Genome Size 4,484,616 bp
Protein Count 4,020
Coding Density 89.40%
GC Percentage 66.84%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM143166v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04207868
Country Sri Lanka
Date 2015-11-4
Genbank Assembly Accession GCA_001431665.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source Piper betle
Latitude Longitude None
Molecule Count N/A
CDS Count 4,018
Refseq Category na
Seq Rel Date 2015/11/04
Spanned Gaps 0
Species Taxid 40324
SSU Count 1
Submitter CSIR-Institute of Microbial Technology
Taxid 40324
Total Gap Length 0
Translation Table 11
tRNA Count (total) 67
Type Material assembly from synonym type material
Unspanned Gaps 0
Version Status latest
WGS Master LLXV00000000.1