Stenotrophomonas terrae
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Stenotrophomonas; s__Stenotrophomonas terrae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Stenotrophomonas; s__Stenotrophomonas terrae
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Stenotrophomonas; s__Stenotrophomonas terrae
NCBI Strain Identifiers DSM 18941
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.19%
CheckM Contamination 1.38%
CheckM Strain Heterogeneity 25.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 143
N50 Contigs 96,150 bp
Longest Contig 205,645 bp
Scaffold Count 143
N50 Scaffolds 96,150 bp
Longest Scaffold 205,645 bp
Genome Size 4,410,319 bp
Protein Count 3,803
Coding Density 87.68%
GC Percentage 63.89%
Ambiguous Bases N/A
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name ASM143146v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03701677
Country Belgium
Date 2015-11-4
Genbank Assembly Accession GCA_001431465.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source soil
Latitude Longitude None
Molecule Count N/A
CDS Count 3,789
Refseq Category na
Seq Rel Date 2015/11/04
Spanned Gaps 0
Species Taxid 405446
SSU Count 1
Submitter CSIR-Institute of Microbial Technology
Taxid 405446
Total Gap Length 0
Translation Table 11
tRNA Count (total) 60
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master LDJJ00000000.1