Pseudovibrio sp900143565
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Stappiaceae; g__Pseudovibrio; s__Pseudovibrio sp900143565
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Rhodobacteraceae; g__Pseudovibrio; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhodobacterales; f__Rhodobacteraceae; g__Pseudovibrio; s__Pseudovibrio sp. POLY-S9
NCBI Strain Identifiers POLY-S9
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900143565.1)
Genome Characteristics
CheckM Completeness 93.62%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 763
N50 Contigs 18,360 bp
Longest Contig 77,364 bp
Scaffold Count 271
N50 Scaffolds 123,351 bp
Longest Scaffold 413,530 bp
Genome Size 6,603,616 bp
Protein Count 6,302
Coding Density 82.40%
GC Percentage 51.26%
Ambiguous Bases N/A
GTDB representative GCA_900143565.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM143130v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN03217285
Country Portugal: Praia da Memoria
Date 2015-11-4
Genbank Assembly Accession GCA_001431305.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source None
Latitude Longitude None
Molecule Count N/A
CDS Count 6,205
Refseq Category na
Seq Rel Date 2015/11/04
Spanned Gaps 492
Species Taxid 1576596
SSU Count 1
Submitter Interdisciplinary Centre of Marine and Environmental Research
Taxid 1576596
Total Gap Length 53997
Translation Table 11
tRNA Count (total) 61
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LCWX00000000.1