Mycobacterium abscessus
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Mycobacteriales; f__Mycobacteriaceae; g__Mycobacterium; s__Mycobacterium abscessus
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Mycobacteriaceae; g__Mycobacteroides; s__Mycobacteroides abscessus
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Corynebacteriales; f__Mycobacteriaceae; g__Mycobacteroides; s__Mycobacteroides abscessus
NCBI Strain Identifiers NOV0213
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000069185.1)
Genome Characteristics
CheckM Completeness 99.5%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 1
N50 Contigs 5,173,145 bp
Longest Contig 5,173,145 bp
Scaffold Count 1
N50 Scaffolds 5,173,145 bp
Longest Scaffold 5,173,145 bp
Genome Size 5,173,145 bp
Protein Count 5,189
Coding Density 92.28%
GC Percentage 64.21%
Ambiguous Bases 164
GTDB representative GCA_000069185.1
GTDB representative of species False
NCBI Metadata
Assembly Level Complete Genome
Assembly Name ASM143077v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04103082
Country Russia: Novosibirsk
Date 2015-11-03
Genbank Assembly Accession GCA_001430775.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source sputum
Latitude Longitude 55.12 N 82.88999999999999 E
Molecule Count 1
CDS Count 5,156
Refseq Category na
Seq Rel Date 2015/11/03
Spanned Gaps 0
Species Taxid 36809
SSU Count 1
Submitter Novosibirsk Research Institute of Tuberculosis
Taxid 36809
Total Gap Length 0
Translation Table 11
tRNA Count (total) 46
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master None