Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Beijerinckiaceae; g__Bosea; s__Bosea sp001429505
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Bradyrhizobiaceae; g__Bosea; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Bradyrhizobiaceae; g__Bosea; s__Bosea sp. Root483D1
NCBI Strain Identifiers Root483D1
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 98.43%
CheckM Contamination 0.94%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 55
N50 Contigs 395,320 bp
Longest Contig 753,725 bp
Scaffold Count 23
N50 Scaffolds 788,094 bp
Longest Scaffold 1,325,115 bp
Genome Size 6,609,529 bp
Protein Count 6,216
Coding Density 89.28%
GC Percentage 66.41%
Ambiguous Bases 191
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name Root483D1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04155813
Country Germany:Cologne
Date 2015-11-2
Genbank Assembly Accession GCA_001429505.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source root
Latitude Longitude 50.958 N 6.856 E
Molecule Count N/A
CDS Count 6,246
Refseq Category na
Seq Rel Date 2015/11/02
Spanned Gaps 32
Species Taxid 1736544
SSU Count 1
Submitter Max Planck Institute for Plant Breeding Research
Taxid 1736544
Total Gap Length 1832
Translation Table 11
tRNA Count (total) 45
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LMJW00000000.1