Bacillus_A thuringiensis_S
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Bacillaceae_G; g__Bacillus_A; s__Bacillus_A thuringiensis_S
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Bacillaceae; g__Bacillus; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Bacillaceae; g__Bacillus; s__Bacillus sp. Root131
NCBI Strain Identifiers Root131
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000021305.1)
Genome Characteristics
CheckM Completeness 99.34%
CheckM Contamination 0.95%
CheckM Strain Heterogeneity 8.33
5S Count 9
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 61
N50 Contigs 349,770 bp
Longest Contig 1,632,909 bp
Scaffold Count 45
N50 Scaffolds 349,770 bp
Longest Scaffold 2,764,033 bp
Genome Size 6,523,787 bp
Protein Count 6,772
Coding Density 83.49%
GC Percentage 34.85%
Ambiguous Bases 269
GTDB representative GCA_000021305.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Root131
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04155720
Country Germany:Cologne
Date 2015-11-2
Genbank Assembly Accession GCA_001429475.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source root
Latitude Longitude 50.958 N 6.856 E
Molecule Count N/A
CDS Count 6,885
Refseq Category na
Seq Rel Date 2015/11/02
Spanned Gaps 16
Species Taxid 1736451
SSU Count 2
Submitter Max Planck Institute for Plant Breeding Research
Taxid 1736451
Total Gap Length 782
Translation Table 11
tRNA Count (total) 109
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LMJQ00000000.1