Bacillus_C megaterium
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Bacillaceae_H; g__Bacillus_C; s__Bacillus_C megaterium
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Bacillaceae; g__Bacillus; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Bacillaceae; g__Bacillus; s__Bacillus sp. Root239
NCBI Strain Identifiers Root239
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000832985.1)
Genome Characteristics
CheckM Completeness 99.43%
CheckM Contamination 0.07%
CheckM Strain Heterogeneity 0.0
5S Count 9
16S Count 2
23S Count 3
tRNA Count 20
Contig Count 52
N50 Contigs 666,812 bp
Longest Contig 1,147,285 bp
Scaffold Count 46
N50 Scaffolds 666,812 bp
Longest Scaffold 1,147,285 bp
Genome Size 5,756,404 bp
Protein Count 5,984
Coding Density 82.06%
GC Percentage 37.49%
Ambiguous Bases 199
GTDB representative GCA_000832985.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Root239
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04155768
Country Germany:Golm
Date 2015-11-2
Genbank Assembly Accession GCA_001429385.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source root
Latitude Longitude 52.416 N 12.968 E
Molecule Count N/A
CDS Count 5,866
Refseq Category na
Seq Rel Date 2015/11/02
Spanned Gaps 6
Species Taxid 1736499
SSU Count 8
Submitter Max Planck Institute for Plant Breeding Research
Taxid 1736499
Total Gap Length 404
Translation Table 11
tRNA Count (total) 104
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LMJS00000000.1