Lysobacter sp001429785
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Lysobacter; s__Lysobacter sp001429785
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Lysobacter; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Xanthomonadales; f__Xanthomonadaceae; g__Lysobacter; s__Lysobacter sp. Root983
NCBI Strain Identifiers Root983
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001429785.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 1.09%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 24
N50 Contigs 1,089,193 bp
Longest Contig 1,480,478 bp
Scaffold Count 22
N50 Scaffolds 1,089,193 bp
Longest Scaffold 1,480,478 bp
Genome Size 4,797,149 bp
Protein Count 4,153
Coding Density 86.62%
GC Percentage 68.30%
Ambiguous Bases 234
GTDB representative GCA_001429785.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Root983
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04155882
Country Germany:Cologne
Date 2015-11-2
Genbank Assembly Accession GCA_001429345.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source root
Latitude Longitude 50.958 N 6.856 E
Molecule Count N/A
CDS Count 4,186
Refseq Category na
Seq Rel Date 2015/11/02
Spanned Gaps 2
Species Taxid 1736613
SSU Count 1
Submitter Max Planck Institute for Plant Breeding Research
Taxid 1736613
Total Gap Length 61
Translation Table 11
tRNA Count (total) 47
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LMJO00000000.1