Ensifer sp001429285
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Rhizobiaceae; g__Ensifer; s__Ensifer sp001429285
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Rhizobiaceae; g__Ensifer; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Rhizobiaceae; x__Sinorhizobium/Ensifer group; g__Ensifer; s__Ensifer sp. Root278
NCBI Strain Identifiers Root278
GTDB Type Material Designation not type material
GTDB Representative of Species True (14 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.96%
CheckM Contamination 0.6%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 48
N50 Contigs 386,615 bp
Longest Contig 855,030 bp
Scaffold Count 44
N50 Scaffolds 386,615 bp
Longest Scaffold 855,030 bp
Genome Size 7,095,460 bp
Protein Count 6,718
Coding Density 86.73%
GC Percentage 62.06%
Ambiguous Bases 243
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name Root278
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04155778
Country Germany:Cologne
Date 2015-11-2
Genbank Assembly Accession GCA_001429285.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source root
Latitude Longitude 50.958 N 6.856 E
Molecule Count N/A
CDS Count 6,711
Refseq Category na
Seq Rel Date 2015/11/02
Spanned Gaps 4
Species Taxid 1736509
SSU Count 1
Submitter Max Planck Institute for Plant Breeding Research
Taxid 1736509
Total Gap Length 141
Translation Table 11
tRNA Count (total) 58
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LMJJ00000000.1