Pararhizobium sp001426665
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Rhizobiaceae; g__Pararhizobium; s__Pararhizobium sp001426665
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Rhizobiaceae; g__Rhizobium; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Rhizobiaceae; x__Rhizobium/Agrobacterium group; g__Rhizobium; s__Rhizobium sp. Root73
NCBI Strain Identifiers Root73
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001426665.1)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 1.59%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 36
N50 Contigs 338,594 bp
Longest Contig 1,081,503 bp
Scaffold Count 34
N50 Scaffolds 338,594 bp
Longest Scaffold 1,081,503 bp
Genome Size 6,314,006 bp
Protein Count 6,015
Coding Density 87.72%
GC Percentage 59.39%
Ambiguous Bases 83
GTDB representative GCA_001426665.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Root73
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04155865
Country Germany:Cologne
Date 2015-11-2
Genbank Assembly Accession GCA_001429075.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source root
Latitude Longitude 50.958 N 6.856 E
Molecule Count N/A
CDS Count 5,970
Refseq Category na
Seq Rel Date 2015/11/02
Spanned Gaps 2
Species Taxid 1736596
SSU Count 1
Submitter Max Planck Institute for Plant Breeding Research
Taxid 1736596
Total Gap Length 39
Translation Table 11
tRNA Count (total) 47
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LMIF00000000.1