Pararhizobium sp001424985
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Rhizobiaceae; g__Pararhizobium; s__Pararhizobium sp001424985
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Rhizobiaceae; g__Rhizobium; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Rhizobiaceae; x__Rhizobium/Agrobacterium group; g__Rhizobium; s__Rhizobium sp. Root268
NCBI Strain Identifiers Root268
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001424985.1)
Genome Characteristics
CheckM Completeness 98.6%
CheckM Contamination 1.08%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 32
N50 Contigs 367,642 bp
Longest Contig 1,499,264 bp
Scaffold Count 32
N50 Scaffolds 367,642 bp
Longest Scaffold 1,499,264 bp
Genome Size 5,345,506 bp
Protein Count 5,030
Coding Density 87.94%
GC Percentage 61.78%
Ambiguous Bases 55
GTDB representative GCA_001424985.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name Root268
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04155775
Country Germany:Golm
Date 2015-11-2
Genbank Assembly Accession GCA_001428925.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source root
Latitude Longitude 52.416 N 12.968 E
Molecule Count N/A
CDS Count 4,983
Refseq Category na
Seq Rel Date 2015/11/02
Spanned Gaps 0
Species Taxid 1736506
SSU Count 1
Submitter Max Planck Institute for Plant Breeding Research
Taxid 1736506
Total Gap Length 0
Translation Table 11
tRNA Count (total) 47
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LMJD00000000.1