Leifsonia sp001428745
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Actinomycetales; f__Microbacteriaceae; g__Leifsonia; s__Leifsonia sp001428745
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Micrococcales; f__Microbacteriaceae; g__Leifsonia; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Micrococcales; f__Microbacteriaceae; g__Leifsonia; s__Leifsonia sp. Root227
NCBI Strain Identifiers Root227
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.24%
CheckM Contamination 0.32%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 7
N50 Contigs 1,071,516 bp
Longest Contig 1,086,373 bp
Scaffold Count 7
N50 Scaffolds 1,071,516 bp
Longest Scaffold 1,086,373 bp
Genome Size 4,067,614 bp
Protein Count 3,855
Coding Density 92.21%
GC Percentage 68.52%
Ambiguous Bases 66
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name Root227
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04155765
Country France
Date 2015-11-2
Genbank Assembly Accession GCA_001428745.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source root
Latitude Longitude 47.941 N 4.012 W
Molecule Count N/A
CDS Count 3,811
Refseq Category na
Seq Rel Date 2015/11/02
Spanned Gaps 0
Species Taxid 1736496
SSU Count 1
Submitter Max Planck Institute for Plant Breeding Research
Taxid 1736496
Total Gap Length 0
Translation Table 11
tRNA Count (total) 48
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LMIO00000000.1