Paenibacillus_E sp001428105
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Paenibacillales; f__Paenibacillaceae; g__Paenibacillus_E; s__Paenibacillus_E sp001428105
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Paenibacillaceae; g__Paenibacillus; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Paenibacillaceae; g__Paenibacillus; s__Paenibacillus sp. Soil766
NCBI Strain Identifiers Soil766
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.19%
CheckM Contamination 1.61%
CheckM Strain Heterogeneity 0.0
5S Count 8
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 75
N50 Contigs 174,146 bp
Longest Contig 476,528 bp
Scaffold Count 60
N50 Scaffolds 222,054 bp
Longest Scaffold 528,861 bp
Genome Size 8,257,780 bp
Protein Count 7,080
Coding Density 87.61%
GC Percentage 45.07%
Ambiguous Bases 240
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name Soil766
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04155669
Country Germany:Cologne
Date 2015-11-2
Genbank Assembly Accession GCA_001428105.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source soil
Latitude Longitude 50.958 N 6.856 E
Molecule Count N/A
CDS Count 6,942
Refseq Category na
Seq Rel Date 2015/11/02
Spanned Gaps 15
Species Taxid 1736404
SSU Count 6
Submitter ETH Zurich
Taxid 1736404
Total Gap Length 820
Translation Table 11
tRNA Count (total) 105
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LMSJ00000000.1