Agrobacterium sp000192635
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Rhizobiaceae; g__Agrobacterium; s__Agrobacterium sp000192635
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Rhizobiaceae; g__Rhizobium; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Rhizobiaceae; x__Rhizobium/Agrobacterium group; g__Rhizobium; s__Rhizobium sp. Root491
NCBI Strain Identifiers Root491
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000192635.1)
Genome Characteristics
CheckM Completeness 99.98%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 21
N50 Contigs 675,815 bp
Longest Contig 1,369,315 bp
Scaffold Count 20
N50 Scaffolds 675,815 bp
Longest Scaffold 1,369,315 bp
Genome Size 5,513,853 bp
Protein Count 5,224
Coding Density 88.25%
GC Percentage 58.57%
Ambiguous Bases 81
GTDB representative GCA_000192635.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Root491
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04155817
Country Germany:Golm
Date 2015-11-2
Genbank Assembly Accession GCA_001427205.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source root
Latitude Longitude 52.416 N 12.968 E
Molecule Count N/A
CDS Count 5,263
Refseq Category na
Seq Rel Date 2015/11/02
Spanned Gaps 1
Species Taxid 1736548
SSU Count 1
Submitter Max Planck Institute for Plant Breeding Research
Taxid 1736548
Total Gap Length 74
Translation Table 11
tRNA Count (total) 46
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LMFF00000000.1