Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Rhizobiaceae; g__Ensifer; s__Ensifer adhaerens
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Rhizobiaceae; g__Ensifer; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Rhizobiaceae; x__Sinorhizobium/Ensifer group; g__Ensifer; s__Ensifer sp. Root558
NCBI Strain Identifiers Root558
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000697965.2)
Genome Characteristics
CheckM Completeness 99.96%
CheckM Contamination 1.73%
CheckM Strain Heterogeneity 11.11
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 44
N50 Contigs 484,687 bp
Longest Contig 1,205,103 bp
Scaffold Count 39
N50 Scaffolds 484,687 bp
Longest Scaffold 1,206,258 bp
Genome Size 7,184,309 bp
Protein Count 6,814
Coding Density 86.72%
GC Percentage 62.35%
Ambiguous Bases 202
GTDB representative GCA_000697965.2
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Root558
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04155827
Country Germany:Cologne
Date 2015-11-2
Genbank Assembly Accession GCA_001427045.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source root
Latitude Longitude 50.958 N 6.856 E
Molecule Count N/A
CDS Count 6,800
Refseq Category na
Seq Rel Date 2015/11/02
Spanned Gaps 5
Species Taxid 1736558
SSU Count 2
Submitter Max Planck Institute for Plant Breeding Research
Taxid 1736558
Total Gap Length 359
Translation Table 11
tRNA Count (total) 59
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LMGC00000000.1