Pararhizobium sp001426685
Isolate HQ 16S/23S 18 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Rhizobiaceae; g__Pararhizobium; s__Pararhizobium sp001426685
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Rhizobiaceae; g__Rhizobium; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Rhizobiaceae; x__Rhizobium/Agrobacterium group; g__Rhizobium; s__Rhizobium sp. Root483D2
NCBI Strain Identifiers Root483D2
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.51%
CheckM Contamination 1.52%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 18
Contig Count 147
N50 Contigs 163,885 bp
Longest Contig 547,347 bp
Scaffold Count 44
N50 Scaffolds 260,622 bp
Longest Scaffold 547,347 bp
Genome Size 6,042,950 bp
Protein Count 5,770
Coding Density 87.24%
GC Percentage 60.00%
Ambiguous Bases 101
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name Root483D2
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04155814
Country Germany:Cologne
Date 2015-11-2
Genbank Assembly Accession GCA_001426685.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source root
Latitude Longitude 50.958 N 6.856 E
Molecule Count N/A
CDS Count 5,754
Refseq Category na
Seq Rel Date 2015/11/02
Spanned Gaps 103
Species Taxid 1736545
SSU Count 1
Submitter Max Planck Institute for Plant Breeding Research
Taxid 1736545
Total Gap Length 6220
Translation Table 11
tRNA Count (total) 41
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LMFB00000000.1