Aeromicrobium sp001426485
Isolate HQ 16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Propionibacteriales; f__Nocardioidaceae; g__Aeromicrobium; s__Aeromicrobium sp001426485
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Propionibacteriales; f__Nocardioidaceae; g__Aeromicrobium; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Propionibacteriales; f__Nocardioidaceae; g__Aeromicrobium; s__Aeromicrobium sp. Root472D3
NCBI Strain Identifiers Root472D3
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.74%
CheckM Contamination 1.21%
CheckM Strain Heterogeneity 0.0
5S Count 0
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 17
N50 Contigs 479,180 bp
Longest Contig 1,331,459 bp
Scaffold Count 4
N50 Scaffolds 3,001,379 bp
Longest Scaffold 3,001,379 bp
Genome Size 3,707,866 bp
Protein Count 3,656
Coding Density 92.73%
GC Percentage 71.34%
Ambiguous Bases 74
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name Root472D3
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04155809
Country Germany:Cologne
Date 2015-11-2
Genbank Assembly Accession GCA_001426485.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source root
Latitude Longitude 50.958 N 6.856 E
Molecule Count N/A
CDS Count 3,593
Refseq Category na
Seq Rel Date 2015/11/02
Spanned Gaps 13
Species Taxid 1736540
SSU Count 1
Submitter Max Planck Institute for Plant Breeding Research
Taxid 1736540
Total Gap Length 541
Translation Table 11
tRNA Count (total) 45
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LMET00000000.1