Bacillus_C megaterium
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Bacillaceae_H; g__Bacillus_C; s__Bacillus_C megaterium
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Bacillaceae; g__Bacillus; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Bacillaceae; g__Bacillus; s__Bacillus sp. Leaf75
NCBI Strain Identifiers Leaf75
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000832985.1)
Genome Characteristics
CheckM Completeness 99.43%
CheckM Contamination 2.03%
CheckM Strain Heterogeneity 23.08
5S Count 8
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 80
N50 Contigs 236,970 bp
Longest Contig 684,201 bp
Scaffold Count 75
N50 Scaffolds 236,970 bp
Longest Scaffold 684,201 bp
Genome Size 6,031,561 bp
Protein Count 6,229
Coding Density 81.72%
GC Percentage 37.39%
Ambiguous Bases 178
GTDB representative GCA_000832985.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Leaf75
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04151615
Country Switzerland:Zurich
Date 2015-11-2
Genbank Assembly Accession GCA_001426025.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source leaf
Latitude Longitude 47.4816806 N 8.217547222 E
Molecule Count N/A
CDS Count 6,100
Refseq Category na
Seq Rel Date 2015/11/02
Spanned Gaps 5
Species Taxid 1736235
SSU Count 6
Submitter Max Planck Institute for Plant Breeding Research
Taxid 1736235
Total Gap Length 161
Translation Table 11
tRNA Count (total) 102
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LMRL00000000.1