Streptomyces canus
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Actinobacteriota; c__Actinomycetia; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces canus
Filtered NCBI Taxonomy d__Bacteria; p__Actinobacteria; c__Actinobacteria; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Actinobacteria; c__Actinobacteria; o__Streptomycetales; f__Streptomycetaceae; g__Streptomyces; s__Streptomyces sp. Root369
NCBI Strain Identifiers Root369
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001514145.1)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.54%
CheckM Strain Heterogeneity 0.0
5S Count 3
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 78
N50 Contigs 302,259 bp
Longest Contig 636,901 bp
Scaffold Count 65
N50 Scaffolds 345,242 bp
Longest Scaffold 697,407 bp
Genome Size 10,741,251 bp
Protein Count 9,780
Coding Density 88.18%
GC Percentage 70.31%
Ambiguous Bases 328
GTDB representative GCA_001514145.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Root369
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04155792
Country Germany:Cologne
Date 2015-11-02
Genbank Assembly Accession GCA_001425805.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source root
Latitude Longitude 50.958 N 6.856 E
Molecule Count N/A
CDS Count 9,880
Refseq Category na
Seq Rel Date 2015/11/02
Spanned Gaps 13
Species Taxid 1736523
SSU Count 1
Submitter Max Planck Institute for Plant Breeding Research
Taxid 1736523
Total Gap Length 584
Translation Table 11
tRNA Count (total) 71
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LMDL00000000.1