Leaf443 sp001425575
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Rhizobiaceae; g__Leaf443; s__Leaf443 sp001425575
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Aurantimonadaceae; g__Aurantimonas; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Aurantimonadaceae; g__Aurantimonas; s__Aurantimonas sp. Leaf443
NCBI Strain Identifiers Leaf443
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.19%
CheckM Contamination 0.4%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 13
N50 Contigs 699,723 bp
Longest Contig 804,273 bp
Scaffold Count 13
N50 Scaffolds 699,723 bp
Longest Scaffold 804,273 bp
Genome Size 3,908,067 bp
Protein Count 3,557
Coding Density 88.70%
GC Percentage 69.92%
Ambiguous Bases 28
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name Leaf443
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04151768
Country Switzerland:Zurich
Date 2015-11-2
Genbank Assembly Accession GCA_001425575.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source leaf
Latitude Longitude 47.4816806 N 8.217547222 E
Molecule Count N/A
CDS Count 3,528
Refseq Category na
Seq Rel Date 2015/11/02
Spanned Gaps 0
Species Taxid 1736378
SSU Count 1
Submitter Max Planck Institute for Plant Breeding Research
Taxid 1736378
Total Gap Length 0
Translation Table 11
tRNA Count (total) 44
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LMRD00000000.1