Leaf454 sp001425485
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Rhizobiaceae; g__Leaf454; s__Leaf454 sp001425485
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Aurantimonadaceae; g__Aureimonas; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Aurantimonadaceae; g__Aureimonas; s__Aureimonas sp. Leaf427
NCBI Strain Identifiers Leaf427
GTDB Type Material Designation not type material
GTDB Representative of Species True (2 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.6%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 2
23S Count 2
tRNA Count 20
Contig Count 53
N50 Contigs 323,538 bp
Longest Contig 688,298 bp
Scaffold Count 53
N50 Scaffolds 323,538 bp
Longest Scaffold 688,298 bp
Genome Size 5,438,231 bp
Protein Count 5,101
Coding Density 86.87%
GC Percentage 67.02%
Ambiguous Bases 110
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name Leaf427
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04151765
Country Switzerland:Zurich
Date 2015-11-2
Genbank Assembly Accession GCA_001425485.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source leaf
Latitude Longitude 47.4816806 N 8.217547222 E
Molecule Count N/A
CDS Count 5,049
Refseq Category na
Seq Rel Date 2015/11/02
Spanned Gaps 0
Species Taxid 1736375
SSU Count 2
Submitter Max Planck Institute for Plant Breeding Research
Taxid 1736375
Total Gap Length 0
Translation Table 11
tRNA Count (total) 47
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LMQW00000000.1