Devosia sp001425235
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Devosiaceae; g__Devosia; s__Devosia sp001425235
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Hyphomicrobiaceae; g__Devosia; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Hyphomicrobiaceae; g__Devosia; s__Devosia sp. Root413D1
NCBI Strain Identifiers Root413D1
GTDB Type Material Designation not type material
GTDB Representative of Species True (2 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.44%
CheckM Contamination 1.43%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 17
N50 Contigs 733,612 bp
Longest Contig 1,033,020 bp
Scaffold Count 14
N50 Scaffolds 733,612 bp
Longest Scaffold 1,033,020 bp
Genome Size 5,851,492 bp
Protein Count 5,616
Coding Density 88.96%
GC Percentage 65.38%
Ambiguous Bases 28
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name Root413D1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04155800
Country Germany:Cologne
Date 2015-11-2
Genbank Assembly Accession GCA_001425235.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source root
Latitude Longitude 50.958 N 6.856 E
Molecule Count N/A
CDS Count 5,566
Refseq Category na
Seq Rel Date 2015/11/02
Spanned Gaps 3
Species Taxid 1736531
SSU Count 1
Submitter Max Planck Institute for Plant Breeding Research
Taxid 1736531
Total Gap Length 131
Translation Table 11
tRNA Count (total) 49
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LMEA00000000.1