Devosia sp001425235
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Devosiaceae; g__Devosia; s__Devosia sp001425235
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Hyphomicrobiaceae; g__Devosia; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Hyphomicrobiaceae; g__Devosia; s__Devosia sp. Root105
NCBI Strain Identifiers Root105
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_001425235.1)
Genome Characteristics
CheckM Completeness 99.44%
CheckM Contamination 1.43%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 25
N50 Contigs 400,191 bp
Longest Contig 967,720 bp
Scaffold Count 21
N50 Scaffolds 540,839 bp
Longest Scaffold 1,147,598 bp
Genome Size 5,850,260 bp
Protein Count 5,656
Coding Density 89.05%
GC Percentage 65.37%
Ambiguous Bases 65
GTDB representative GCA_001425235.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Root105
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04155692
Country Germany:Cologne
Date 2015-11-2
Genbank Assembly Accession GCA_001424865.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source root
Latitude Longitude 50.958 N 6.856 E
Molecule Count N/A
CDS Count 5,592
Refseq Category na
Seq Rel Date 2015/11/02
Spanned Gaps 4
Species Taxid 1736423
SSU Count 1
Submitter Max Planck Institute for Plant Breeding Research
Taxid 1736423
Total Gap Length 115
Translation Table 11
tRNA Count (total) 47
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LMCR00000000.1