Chryseobacterium sp001424585
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Flavobacteriales; f__Weeksellaceae; g__Chryseobacterium; s__Chryseobacterium sp001424585
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Flavobacteriia; o__Flavobacteriales; f__Flavobacteriaceae; g__Chryseobacterium; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Flavobacteriia; o__Flavobacteriales; f__Flavobacteriaceae; g__Chryseobacterium; s__Chryseobacterium sp. Leaf180
NCBI Strain Identifiers Leaf180
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 100.0%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 15
N50 Contigs 436,909 bp
Longest Contig 1,537,922 bp
Scaffold Count 15
N50 Scaffolds 436,909 bp
Longest Scaffold 1,537,922 bp
Genome Size 3,353,784 bp
Protein Count 3,123
Coding Density 89.63%
GC Percentage 38.33%
Ambiguous Bases 68
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name Leaf180
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04151669
Country Switzerland:Zurich
Date 2015-11-02
Genbank Assembly Accession GCA_001424585.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source leaf
Latitude Longitude 47.4816806 N 8.217547222 E
Molecule Count N/A
CDS Count 3,052
Refseq Category na
Seq Rel Date 2015/11/02
Spanned Gaps 0
Species Taxid 1736289
SSU Count 1
Submitter Max Planck Institute for Plant Breeding Research
Taxid 1736289
Total Gap Length 0
Translation Table 11
tRNA Count (total) 48
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LMPJ00000000.1