Methylobacterium sp001422985
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Beijerinckiaceae; g__Methylobacterium; s__Methylobacterium sp001422985
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Methylobacteriaceae; g__Methylobacterium; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Methylobacteriaceae; g__Methylobacterium; s__Methylobacterium sp. Leaf117
NCBI Strain Identifiers Leaf117
GTDB Type Material Designation not type material
GTDB Representative of Species True (2 genomes in species cluster)
Genome Characteristics
CheckM Completeness 99.37%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 45
N50 Contigs 626,185 bp
Longest Contig 963,506 bp
Scaffold Count 40
N50 Scaffolds 626,185 bp
Longest Scaffold 963,506 bp
Genome Size 5,320,575 bp
Protein Count 4,966
Coding Density 85.14%
GC Percentage 67.70%
Ambiguous Bases 191
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name Leaf117
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04151640
Country Switzerland:Zurich
Date 2015-11-2
Genbank Assembly Accession GCA_001422985.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source leaf
Latitude Longitude 47.4816806 N 8.217547222 E
Molecule Count N/A
CDS Count 4,865
Refseq Category na
Seq Rel Date 2015/11/02
Spanned Gaps 5
Species Taxid 1736260
SSU Count 1
Submitter Max Planck Institute for Plant Breeding Research
Taxid 1736260
Total Gap Length 213
Translation Table 11
tRNA Count (total) 49
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LMNL00000000.1