Methylobacterium extorquens
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Beijerinckiaceae; g__Methylobacterium; s__Methylobacterium extorquens
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Methylobacteriaceae; g__Methylobacterium; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Methylobacteriaceae; g__Methylobacterium; s__Methylobacterium sp. Leaf119
NCBI Strain Identifiers Leaf119
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_900234795.1)
Genome Characteristics
CheckM Completeness 99.37%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 157
N50 Contigs 114,577 bp
Longest Contig 383,941 bp
Scaffold Count 25
N50 Scaffolds 381,535 bp
Longest Scaffold 808,071 bp
Genome Size 5,423,799 bp
Protein Count 4,961
Coding Density 84.14%
GC Percentage 68.24%
Ambiguous Bases 70
GTDB representative GCA_900234795.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Leaf119
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04151641
Country Switzerland:Zurich
Date 2015-11-2
Genbank Assembly Accession GCA_001422935.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source leaf
Latitude Longitude 47.4816806 N 8.217547222 E
Molecule Count N/A
CDS Count 4,955
Refseq Category na
Seq Rel Date 2015/11/02
Spanned Gaps 132
Species Taxid 1736261
SSU Count 1
Submitter Max Planck Institute for Plant Breeding Research
Taxid 1736261
Total Gap Length 7174
Translation Table 11
tRNA Count (total) 45
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LMNN00000000.1