Flavobacterium sp001422725
Isolate HQ 5S/16S/23S 19 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Bacteroidota; c__Bacteroidia; o__Flavobacteriales; f__Flavobacteriaceae; g__Flavobacterium; s__Flavobacterium sp001422725
Filtered NCBI Taxonomy d__Bacteria; p__Bacteroidetes; c__Flavobacteriia; o__Flavobacteriales; f__Flavobacteriaceae; g__Flavobacterium; s__
Unfiltered NCBI Taxonomy d__Bacteria; x__FCB group; x__Bacteroidetes/Chlorobi group; p__Bacteroidetes; c__Flavobacteriia; o__Flavobacteriales; f__Flavobacteriaceae; g__Flavobacterium; s__Flavobacterium sp. Leaf82
NCBI Strain Identifiers Leaf82
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.65%
CheckM Contamination 0.55%
CheckM Strain Heterogeneity 25.0
5S Count 2
16S Count 1
23S Count 1
tRNA Count 19
Contig Count 37
N50 Contigs 308,751 bp
Longest Contig 861,039 bp
Scaffold Count 37
N50 Scaffolds 308,751 bp
Longest Scaffold 861,039 bp
Genome Size 5,674,764 bp
Protein Count 4,783
Coding Density 87.43%
GC Percentage 33.35%
Ambiguous Bases 75
GTDB representative of species True
NCBI Metadata
Assembly Level Contig
Assembly Name Leaf82
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04151618
Country Switzerland:Zurich
Date 2015-11-02
Genbank Assembly Accession GCA_001422725.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source leaf
Latitude Longitude 47.4090306 N 8.470169444 E
Molecule Count N/A
CDS Count 4,700
Refseq Category na
Seq Rel Date 2015/11/02
Spanned Gaps 0
Species Taxid 1736238
SSU Count 1
Submitter Max Planck Institute for Plant Breeding Research
Taxid 1736238
Total Gap Length 0
Translation Table 11
tRNA Count (total) 53
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LMMA00000000.1