Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Enterobacteriaceae; g__Rouxiella; s__Rouxiella silvae
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Yersiniaceae; g__Serratia; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Gammaproteobacteria; o__Enterobacterales; f__Yersiniaceae; g__Serratia; s__Serratia sp. Leaf50
NCBI Strain Identifiers Leaf50
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_002093625.1)
Genome Characteristics
CheckM Completeness 99.67%
CheckM Contamination 0.69%
CheckM Strain Heterogeneity 0.0
5S Count 5
16S Count 1
23S Count 1
tRNA Count 18
Contig Count 22
N50 Contigs 513,086 bp
Longest Contig 940,907 bp
Scaffold Count 21
N50 Scaffolds 513,086 bp
Longest Scaffold 940,907 bp
Genome Size 5,390,593 bp
Protein Count 4,923
Coding Density 87.42%
GC Percentage 50.79%
Ambiguous Bases 61
GTDB representative GCA_002093625.1
GTDB representative of species False
NCBI Metadata
Assembly Level Scaffold
Assembly Name Leaf50
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04151603
Country Switzerland: Zurich
Date 2015-11-2
Genbank Assembly Accession GCA_001422565.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source leaf
Latitude Longitude 47.4816806 N 8.217547222 E
Molecule Count N/A
CDS Count 4,905
Refseq Category na
Seq Rel Date 2015/11/02
Spanned Gaps 1
Species Taxid 1736223
SSU Count 1
Submitter Max Planck Institute for Plant Breeding Research
Taxid 1736223
Total Gap Length 37
Translation Table 11
tRNA Count (total) 66
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LMLI00000000.1