Methylobacterium sp001422375
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Beijerinckiaceae; g__Methylobacterium; s__Methylobacterium sp001422375
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Methylobacteriaceae; g__Methylobacterium; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Methylobacteriaceae; g__Methylobacterium; s__Methylobacterium sp. Leaf99
NCBI Strain Identifiers Leaf99
GTDB Type Material Designation not type material
GTDB Representative of Species True (1 genome in species cluster)
Genome Characteristics
CheckM Completeness 99.37%
CheckM Contamination 0.31%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 17
N50 Contigs 474,127 bp
Longest Contig 2,211,552 bp
Scaffold Count 14
N50 Scaffolds 908,384 bp
Longest Scaffold 2,211,552 bp
Genome Size 4,645,412 bp
Protein Count 4,351
Coding Density 86.23%
GC Percentage 69.60%
Ambiguous Bases 76
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name Leaf99
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04151631
Country Germany:Tubingen
Date 2015-11-2
Genbank Assembly Accession GCA_001422375.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source leaf
Latitude Longitude 48.5560194 N 9.134944444 E
Molecule Count N/A
CDS Count 4,295
Refseq Category na
Seq Rel Date 2015/11/02
Spanned Gaps 3
Species Taxid 1736251
SSU Count 1
Submitter Max Planck Institute for Plant Breeding Research
Taxid 1736251
Total Gap Length 95
Translation Table 11
tRNA Count (total) 49
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LMMU00000000.1