Methylobacterium sp000376345
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Beijerinckiaceae; g__Methylobacterium; s__Methylobacterium sp000376345
Filtered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Methylobacteriaceae; g__Methylobacterium; s__
Unfiltered NCBI Taxonomy d__Bacteria; p__Proteobacteria; c__Alphaproteobacteria; o__Rhizobiales; f__Methylobacteriaceae; g__Methylobacterium; s__Methylobacterium sp. Leaf85
NCBI Strain Identifiers Leaf85
GTDB Type Material Designation not type material
GTDB Representative of Species False (representative is GCA_000376345.1)
Genome Characteristics
CheckM Completeness 99.84%
CheckM Contamination 0.0%
CheckM Strain Heterogeneity 0.0
5S Count 1
16S Count 1
23S Count 1
tRNA Count 20
Contig Count 35
N50 Contigs 329,657 bp
Longest Contig 548,297 bp
Scaffold Count 35
N50 Scaffolds 329,657 bp
Longest Scaffold 548,297 bp
Genome Size 5,143,223 bp
Protein Count 4,823
Coding Density 85.70%
GC Percentage 66.95%
Ambiguous Bases 109
GTDB representative GCA_000376345.1
GTDB representative of species False
NCBI Metadata
Assembly Level Contig
Assembly Name Leaf85
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04151621
Country Switzerland:Zurich
Date 2015-11-2
Genbank Assembly Accession GCA_001422125.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source leaf
Latitude Longitude 47.4816806 N 8.217547222 E
Molecule Count N/A
CDS Count 4,758
Refseq Category na
Seq Rel Date 2015/11/02
Spanned Gaps 0
Species Taxid 1736241
SSU Count 1
Submitter Max Planck Institute for Plant Breeding Research
Taxid 1736241
Total Gap Length 0
Translation Table 11
tRNA Count (total) 47
Type Material None
Unspanned Gaps 0
Version Status latest
WGS Master LMME00000000.1