Bacillus_AJ shackletonii
Isolate HQ 5S/16S/23S 20 tRNAs
Taxonomic Information
GTDB Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Bacillaceae_C; g__Bacillus_AJ; s__Bacillus_AJ shackletonii
Filtered NCBI Taxonomy d__Bacteria; p__Firmicutes; c__Bacilli; o__Bacillales; f__Bacillaceae; g__Bacillus; s__Bacillus shackletonii
Unfiltered NCBI Taxonomy d__Bacteria; x__Terrabacteria group; p__Firmicutes; c__Bacilli; o__Bacillales; f__Bacillaceae; g__Bacillus; s__Bacillus shackletonii
NCBI Strain Identifiers LMG 18435
GTDB Type Material Designation type strain of species
GTDB Representative of Species True (2 genomes in species cluster)
Genome Characteristics
CheckM Completeness 98.53%
CheckM Contamination 3.21%
CheckM Strain Heterogeneity 0.0
5S Count 11
16S Count 8
23S Count 9
tRNA Count 20
Contig Count 52
N50 Contigs 298,412 bp
Longest Contig 615,782 bp
Scaffold Count 24
N50 Scaffolds 3,831,633 bp
Longest Scaffold 3,831,633 bp
Genome Size 5,297,592 bp
Protein Count 5,092
Coding Density 81.43%
GC Percentage 36.71%
Ambiguous Bases 10
GTDB representative of species True
NCBI Metadata
Assembly Level Scaffold
Assembly Name ASM142071v1
Assembly Type n/a
Bioproject PRJNA224116
Biosample SAMN04038048
Country None
Date 2015-10-30
Genbank Assembly Accession GCA_001420715.1
Genome Category Isolate
Genome Representation full
Isolate None
Isolation Source soil
Latitude Longitude None
Molecule Count N/A
CDS Count 5,010
Refseq Category representative genome
Seq Rel Date 2015/10/30
Spanned Gaps 28
Species Taxid 157838
SSU Count 10
Submitter Fujian Academy of Agricultural Sciences
Taxid 157838
Total Gap Length 33562
Translation Table 11
tRNA Count (total) 97
Type Material assembly from type material
Unspanned Gaps 0
Version Status latest
WGS Master LJJC00000000.1